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Showing 22 results

Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool

Author

O'Toole, Áine Niamh; Scher, Emily; Underwood, Anthony; Jackson, Ben; Hill, Verity; McCrone, John T.; Colquhoun, Rachel M.; Ruis, Christopher; Abu-Dahab, Khalil; Taylor, Ben and 9 others

Source

Virus Evolution

Type

Journal article

Published

30 July 2021
Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

Author

Faria, Nuno Rodrigues; Mellan, Thomas A.; Whittaker, Charles; Claro, Ingra M.; da Silva Candido, Darlan; Mishra, Swapnil; Crispim, Myuki A.E.; Sales, Flávia Cristina Silva; Hawryluk, Iwona; McCrone, John T. and 62 others

Source

Science

Type

Journal article

Published

14 April 2021
Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

Author

Volz, Erik; Mishra, Swapnil; Chand, Meera; Barrett, Jeffrey C.; Johnson, Robert; Geidelberg, Lily; Hinsley, Wes R.; Laydon, Daniel J; Dabrera, Gavin; O'Toole, Áine Niamh and 25 others

Source

Nature

Type

Journal article

Published

25 March 2021
Establishment & lineage dynamics of the SARS-CoV-2 epidemic in the UK

Author

du Plessis, Louis; McCrone, John T.; Zarebski, Alexander E.; Hill, Verity; Ruis, Christopher; Gutierrez, Bernardo; Raghwani, Jayna; Ashworth, Jordan; Colquhoun, Rachel M.; Connor, Thomas R. and 16 others

Source

Science

Type

Journal article

Published

12 February 2021
Author Correction: Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland

Author

Shepherd, James G.; Williams, Thomas; Hughes, Joseph; Aranday-Cortes, Elihu; Asamaphan, Patawee; Ashraf, Shirin; Balcazar, Carlos E.; Brunker, Kirstyn; Campbell, Alasdair; Carmichael, Stephen and 42 others

Source

Nature Microbiology

Type

Journal article

Published

27 January 2021
Epidemic waves of COVID-19 in Scotland: a genomic perspective on the impact of the introduction and relaxation of lockdown on SARS-CoV-2

Author

Lycett, Samantha J.; Hughes, Joseph; McHugh, Martin P.; da Silva Filipe, Ana; Dewar, Rebecca; Lu, Lu; Doherty, Thomas; Shepherd, Amy; Inward, Rhys; Rossi, Gianluigi and 44 others

Source

MedRxiv

Type

Journal article

Published

20 January 2021
Publisher Correction: Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland

Author

da Silva Filipe, Ana; Shepherd, James G.; Williams, Thomas; Hughes, Joseph; Aranday-Cortes, Elihu; Asamaphan, Patawee; Ashraf, Shirin; Balcazar, Carlos E.; Brunker, Kirstyn; Campbell, Alasdair and 43 others

Source

Nature Microbiology

Type

Journal article

Published

18 January 2021
Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland

Author

da Silva Filipe, Ana; Shepherd, James G.; Williams, Thomas; Hughes, Joseph; Aranday-Cortes, Elihu; Asamaphan, Patawee; Ashraf, Shirin; Balcazar, Carlos E.; Brunker, Kirstyn; Campbell, Alasdair and 42 others

Source

Nature Microbiology

Type

Journal article

Published

01 January 2021
Evaluating the effects of SARS-CoV-2 Spike mutation D614G on transmissibility and pathogenicity

Author

Volz, Erik; Hill, Verity; McCrone, John T.; Price, Anna; Jorgensen, David; O'Toole, Áine Niamh; Southgate, Joel; Johnson, Robert; Jackson, Ben; Nascimento, Fabricia F. and 21 others

Source

Cell

Type

Journal article

Published

19 November 2020
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology

Author

Rambaut, Andrew; Holmes, Edward C.; O'Toole, Áine Niamh; Hill, Verity; McCrone, John T.; Ruis, Christopher; du Plessis, Louis; Pybus, Oliver G.

Source

Nature Microbiology

Type

Journal article

Published

01 November 2020