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Showing 9 results

Insights into the implementation of a whole genome sequencing report form (SRF) to reduce nosocomial SARS-CoV-2 in UK hospitals within an unfolding pandemic: a qualitative process evaluation using normalisation process theory (1)

Author

Leiser, Ruth; McLeod, Julie; Mapp, Fiona; Stirrup, Oliver; Blackstone, James; Illingworth, Christopher J.R.; Nebbia, Gaia; Price, James R.; Snell, Luke B.; Saluja, Tranprit and 2 others

Source

PLoS ONE

Type

Journal article

Published

17 April 2025
The P681H mutation in the spike glycoprotein of the alpha variant of SARS-CoV-2 escapes IFITM restriction and is necessary for type I interferon resistance

Author

Lista, Maria Jose; Winstone, Helena; Wilson, Harry; Dyer, Adam; Pickering, Suzanne; Galao, Rui Pedro; de Lorenzo, Giuditta; Cowton, Vanessa M.; Furnon, Wilhelm; Suarez, Nicolas M. and 7 others

Source

Journal of Virology

Type

Journal article

Published

09 November 2022
Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: multicenter, prospective study

Author

Stirrup, Oliver; Blackstone, James; Mapp, Fiona; MacNeil, Alyson; Panca, Monica; Holmes, Alison; Machin, Nicholas W.; Shin, Gee Yen; Mahungu, Tabitha W.; Saeed, Kordo and 38 others

Source

eLife

Type

Journal article

Published

13 September 2022
Protocol for the COG-UK hospital-onset COVID-19 infection (HOCI) multicentre interventional clinical study: evaluating the efficacy of rapid genome sequencing of SARS-CoV-2 in limiting the spread of COVID-19 in UK NHS hospitals

Author

Blackstone, James; Stirrup, Oliver; Mapp, Fiona; Panca, Monica; Copas, Andrew J.; Flowers, Paul; Hockey, Leanne; Price, James R.; Partridge, David G.; Peters, Christine and 6 others

Source

BMJ Open

Type

Journal article

Published

19 April 2022
Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission

Author

Aggarwal, Dinesh; Warne, Ben; Jahun, Aminu S.; Hamilton, William L.; Fieldman, Tom; du Plessis, Louis; Hill, Verity; Blane, Beth; Watkins, Emmeline; Wright, Elizabeth and 713 others

Source

Nature Communications

Type

Journal article

Published

08 February 2022
Genomic reconstruction of the SARS-CoV-2 epidemic in England

Author

Vöhringer, Harald S.; Sanderson, Theo; Sinnott, Matthew; de Maio, Nicola; Nguyen, Thuy; Goater, Richard; Schwach, Frank; Harrison, Ian; Hellewell, Joel; Ariani, Cristina V. and 923 others

Source

Nature

Type

Journal article

Published

16 December 2021
Neutralizing antibody activity in convalescent sera from infection in humans with SARS-CoV-2 and variants of concern

Author

Dupont, Liane; Snell, Luke; Graham, Carl; Seow, Jeffrey; Merrick, Blair; Lechmere, Thomas; Maguire, Thomas J A; Hallett, Sadie R; Pickering, Suzanne; Charalampous, Themoula and 22 others

Source

Nature Microbiology

Type

Journal article

Published

15 October 2021
The Alpha variant was not associated with excess nosocomial SARS-CoV-2 infection in a multi-centre UK hospital study

Author

Boshier, Florencia A.T.; Venturini, Cristina; Stirrup, Oliver; Guerra-Assunção, José Afonso; Alcolea-Medina, Adela; Beckett, Angela H.; Byott, Matthew; Charalampous, Themoula; da Silva Filipe, Ana; Frampton, Dan and 35 others

Source

Journal of Infection

Type

Journal article

Published

02 October 2021
SARS-CoV-2 lineage B.1.1.7 is associated with greater disease severity among hospitalised women but not men: multicentre cohort study

Author

Stirrup, Oliver; Boshier, Florencia A.T.; Venturini, Cristina; Guerra-Assunção, José Afonso; Alcolea-Medina, Adela; Beckett, Angela H.; Charalampous, Themoula; da Silva Filipe, Ana; Glaysher, Sharon; Khan, Tabassum and 33 others

Source

BMJ Open Respiratory Research

Type

Journal article

Published

20 September 2021

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