Viral respiratory diseases (including influenza and COVID-19) in Scotland surveillance report

About this release

This weekly release by Public Health Scotland presents epidemiological information on respiratory infection activity, including COVID-19, across Scotland.

Main points

Overall assessment for the period 2 October 2023 to 8 October 2023 (ISO week 40):

• Measures of respiratory symptoms in the community and via attendances at GP consultations show low levels of respiratory disease activity during the reporting period (NHS24 and GP ILI).
• In the CARI community surveillance system, which tests for 10 different pathogens, swab positivity was highest for rhinovirus at 28.5% in week 40, up from the previous week’s 25.0%. This was followed by COVID-19 which decreased slightly from 10.6% the previous week to 9.2% in week 40. Swab positivity for RSV increased from 6.5% in week 39 to 7.8% in week 40.
• Virology data suggest influenza circulated at Baseline activity level. RSV and Mycoplasma pneumoniae were at Low activity level.
• The overall number of emergency hospital admissions associated with RSV, influenza and COVID-19 have increased during the reporting period. Influenza admissions decreased, RSV admissions increased, and COVID-19 admissions stabilised. COVID-19 remains the largest proportion of admissions. ICU/HDU admissions continue to be low.
• All-cause excess mortality remained at Baseline activity level, overall and for all age groups, during the reporting period. Data for the most recent two weeks is still provisional and should be treated with caution.
• During the current Winter 2023 vaccination programme a total of 619,397 Influenza (Adult 18+), 135,540 Influenza (Children 6 months to 17 years) and 431,122 COVID-19 vaccines have been administered to the Scottish population since 4 September 2023. Information on vaccine uptake for the COVID-19 and influenza vaccine programmes is available via the PHS vaccination surveillance dashboard (external website).

Background

Tracking infectious respiratory diseases, including COVID-19 and influenza, is essential, especially in the winter when the disease burden can be highest. In Scotland, respiratory infection and associated morbidity are monitored using enhanced surveillance. This approach combines data from microbiological sampling and laboratory test results from community and hospital settings with data from syndromic surveillance of NHS 24 calls, primary care consultations for respiratory symptoms, hospital (including intensive care) admissions and other settings.

The intelligence generated from surveillance of laboratory, syndromic and settings provide a comprehensive picture of current respiratory illness in Scotland. The data presented in this report provide a comprehensive and timely epidemiological picture that is essential for understanding transmission of infection and supporting patient care and NHS service planning and policy.

Seasonality patterns / seasonal variations

Respiratory illnesses are associated with seasonal increase in the autumn and winter. Seasonality patterns for both influenza viruses and non-influenza respiratory pathogens have been established through many years of surveillance data. Most influenza and non-influenza pathogens circulate in the autumn and winter in Scotland, although some are known to circulate in the spring and summer. Notably, COVID-19 transmission has been occurring in waves throughout the year as observed from surveillance data since the start of the pandemic in 2020.

Further information

The next release will be 19 October 2023.

Find out more

Previous Publications

Versions of the Weekly national respiratory report publication released before 30 November 2022 may be found on the Public Health Scotland website.

Versions of the COVID-19 weekly statistical report publication released before 30 November 2022 may be found on the Public Health Scotland website.

Open data

Open data from this publication is available from the following weblinks:

• Viral respiratory diseases Open Data platform
• Flu and COVID vaccination uptake Open Data platform

Further data

• The COVID-19 Vaccine Wastage datafile was updated on 18 April 2024 to include the most recent information.
• The COVID-19 in Adult Care Homes in Scotland datafile was updated on 27 July 2023 to include more recent information.
• 28 September 2022 COVID-19 statistical report publication contains information on COVID-19 infection and vaccination in pregnancy in Scotland.
• 2 March 2022 COVID-19 statistical report publication contains information on Highest Risk (shielding patients list)
• 7 November 2023 Community Acute Respiratory Infection (CARI) surveillance in primary care contains information on flu Vaccine effectiveness in community settings.
• 25 May 2023 Interim 2022/23 influenza vaccine effectiveness: six European studies, October 2022 to January 2023, contains information on flu Vaccine effectiveness in hospital settings.
• 13 January 2024 Estimated number of lives directly saved by COVID-19 vaccination programs in the WHO European Region, December 2020 to March 2023, contains information on lives saved due to COVID-19 vaccination